Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 8 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1708: succinylglutamate desuccinylase (RefSeq)
is similar to:

O50177: succinylglutamate desuccinylase (EC from Pseudomonas aeruginosa

39% id,
98% cov

PfGW456L13_1977: Succinylglutamate desuccinylase (EC from Pseudomonas fluorescens

38% id,
98% cov

ASTE_SALTY / Q8ZPU8: Succinylglutamate desuccinylase; EC from Salmonella typhimurium

35% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory