Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 18 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2521: agmatine deiminase (RefSeq)
is similar to:

AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC from Pseudomonas aeruginosa
aguA / Q9I6J9: agmatine deiminase subunit (EC from Pseudomonas aeruginosa
Q9I6J9: agmatine deiminase (EC from Pseudomonas aeruginosa

58% id,
98% cov

AO356_10030: Agmatine deiminase (EC from Pseudomonas fluorescens

57% id,
99% cov

A0A0H3G8U9: agmatine deiminase (EC from Listeria monocytogenes

50% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory