Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3201: arginase/agmatinase/formiminoglutamase (RefSeq)
is similar to:

Sama_3201: Formiminoglutamase (EC from Shewanella amazonensis

100% id,
100% cov

CA265_RS21455: Formiminoglutamase (EC from Pedobacter sp.

37% id,
100% cov

BWI76_RS08725: Formiminoglutamase (EC from Klebsiella michiganensis

30% id,
79% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory