Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2219: fumarylacetoacetate hydrolase family protein (RefSeq)
is similar to:

SO1670: fumarylacetoacetate hydrolase (EC from Shewanella oneidensis

88% id,
100% cov

Psest_3512: fumarylacetoacetate (FAA) hydrolase (EC from Pseudomonas stutzeri

72% id,
99% cov

Sama_1093: fumarylacetoacetate (FAA) hydrolase (RefSeq)
is similar to:

A0A0D5YDA5: fumarylacetoacetase (EC from Acinetobacter baumannii

40% id,
92% cov

A0A0M3SVN7: fumarylacetoacetase (EC from Cupriavidus gilardii

35% id,
82% cov

A0A1B0ZSC0: fumarylacetoacetase (EC from Phaeobacter gallaeciensis

33% id,
82% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory