Searching in Shewanella amazonensis SB2B (SB2B)
Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_3417: kynureninase (RefSeq) is similar to: | PaperBLAST |
KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens | 27% id, 86% cov |
BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans | 25% id, 91% cov |
RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis | 25% id, 91% cov |
| Sama_1293: cysteine desulfurase (RefSeq) is similar to: | PaperBLAST |
AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens | 25% id, 73% cov |
KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens | 24% id, 74% cov |
PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae | 25% id, 73% cov |
| Sama_2777: aminotransferase, class V (RefSeq) is similar to: | PaperBLAST |
RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis | 24% id, 70% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4046296-4047480 (frame -3) on 248323 is similar to: | PaperBLAST |
KYNU_PSEFL / P83788: Kynureninase; L-kynurenine hydrolase; EC 3.7.1.3 from Pseudomonas fluorescens | 26% id, 89% cov |
RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis | 25% id, 94% cov |
AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens | 25% id, 92% cov |
| 1579867-1581111 (frame +1) on 248323 is similar to: | PaperBLAST |
AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens | 25% id, 83% cov |
PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae | 25% id, 83% cov |
BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans | 27% id, 59% cov |
Lawrence Berkeley National Laboratory