Searching in Shewanella amazonensis SB2B (SB2B)
Found 6 curated entries in PaperBLAST's database that match '4.2.1.116' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 18 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_1378: enoyl-CoA hydratase (RefSeq) is similar to: | PaperBLAST |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 40% id, 96% cov |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 35% id, 100% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 37% id, 11% cov |
| Sama_2167: multifunctional fatty acid oxidation complex subunit alpha (RefSeq) is similar to: | PaperBLAST |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 36% id, 91% cov |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 30% id, 95% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 37% id, 11% cov |
| Sama_3135: enoyl-CoA hydratase (RefSeq) is similar to: | PaperBLAST |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 33% id, 86% cov |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 29% id, 88% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 32% id, 11% cov |
| Sama_3635: naphthoate synthase (RefSeq) is similar to: | PaperBLAST |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 28% id, 99% cov |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 28% id, 98% cov |
| Sama_1360: enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 27% id, 98% cov |
| Sama_3052: enoyl-CoA hydratase/isomerase family protein (RefSeq) is similar to: | PaperBLAST |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 28% id, 95% cov |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 29% id, 91% cov |
| Sama_0032: multifunctional fatty acid oxidation complex subunit alpha (RefSeq) is similar to: | PaperBLAST |
HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula | 34% id, 76% cov |
acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi | 31% id, 74% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 37% id, 11% cov |
| Sama_1980: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 34% id, 26% cov |
| Sama_1381: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 34% id, 26% cov |
| Sama_1367: short chain dehydrogenase/reductase family oxidoreductase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 30% id, 30% cov |
| Sama_3393: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 34% id, 25% cov |
| Sama_2079: acetyl-CoA synthetase (RefSeq) is similar to: | PaperBLAST |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 35% id, 24% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 31% id, 10% cov |
| Sama_2250: acetoacetyl-CoA reductase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 33% id, 25% cov |
| Sama_1364: acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) is similar to: | PaperBLAST |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 28% id, 26% cov |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 32% id, 9% cov |
| Sama_2121: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 27% id, 26% cov |
| Sama_0517: D-beta-hydroxybutyrate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 31% id, 20% cov |
| Sama_0389: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans | 28% id, 21% cov |
| Sama_1934: long-chain-fatty-acid--CoA ligase (RefSeq) is similar to: | PaperBLAST |
pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus | 33% id, 4% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory