Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 3 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3296: aconitate hydratase (RefSeq)
is similar to:

ACND_SHEON / Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; ACN; Aconitase; EC; EC from Shewanella oneidensis
acnD / Q8EJW3: 2-methylcitrate dehydratase (EC from Shewanella oneidensis
Q8EJW3: 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC from Shewanella oneidensis

82% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory