Searching in Shewanella amazonensis SB2B (SB2B)
Found 53 curated entries in PaperBLAST's database that match '4.2.1.12'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_2133: tryptophan synthase subunit beta (RefSeq) is similar to: | PaperBLAST |
TrpB / b1261: tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli | 79% id, 99% cov |
trpB / Q9YGB0: tryptophan synthase β subunit (EC 4.2.1.122) from Thermococcus kodakarensis | 58% id, 99% cov |
trpB1 / P50909: β subunit of tryptophan synthase (EC 4.2.1.122) from Thermotoga maritima | 60% id, 96% cov |
| Sama_1810: phosphogluconate dehydratase (RefSeq) is similar to: | PaperBLAST |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 68% id, 100% cov |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 64% id, 100% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 58% id, 98% cov |
| Sama_3279: dihydroxy-acid dehydratase (RefSeq) is similar to: | PaperBLAST |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 32% id, 89% cov |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 28% id, 88% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 31% id, 51% cov |
| Sama_2134: tryptophan synthase subunit alpha (RefSeq) is similar to: | PaperBLAST |
A0A2U8JPY3: tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (EC 4.2.1.20) from Psilocybe cubensis | 30% id, 36% cov |
| Sama_0945: glutamine--fructose-6-phosphate transaminase (isomerizing) (RefSeq) is similar to: | PaperBLAST |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 26% id, 37% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory