Curated BLAST
Searching in Shewanella amazonensis SB2B (SB2B)
Found 14 curated entries in PaperBLAST's database that match '4.2.3.5' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_2159: chorismate synthase (RefSeq)
is similar to: | PaperBLAST |
AROC_ECOLI / P12008: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EPSP phospholyase; EC 4.2.3.5 from Escherichia coli
AroC / b2329: chorismate synthase (EC 4.2.3.5) from Escherichia coli
aroC / P12008: chorismate synthase (EC 4.2.3.5) from Escherichia coli | 76% id,
99% cov |
AROC_HELPY / P56122: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Helicobacter pylori | 46% id,
95% cov |
AROC_YEAST / P28777: Chorismate synthase ARO2; 5-enolpyruvylshikimate-3-phosphate phospholyase; Aromatic amino acid requiring protein 2; EC 1.5.1.38; EC 4.2.3.5 from Saccharomyces cerevisiae | 45% id,
98% cov |
C8Z2I6: chorismate synthase (EC 4.2.3.5) from Verticillium longisporum | 44% id,
98% cov |
B5AAU3: chorismate synthase (EC 4.2.3.5) from Hordeum vulgare | 50% id,
82% cov |
AROC_NEUCR / Q12640: Chorismate synthase aro-2; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 1.5.1.38; EC 4.2.3.5 from Neurospora crassa | 44% id,
92% cov |
AROC_STRPN / P0A2Y6: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Streptococcus pneumoniae | 39% id,
93% cov |
AROC_AQUAE / O66493: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Aquifex aeolicus | 39% id,
92% cov |
Q71Y87: chorismate synthase (EC 4.2.3.5) from Listeria monocytogenes | 38% id,
90% cov |
AROC_STAAU / Q59803: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Staphylococcus aureus | 36% id,
95% cov |
AROC_MYCTU / P9WPY1: Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Mycobacterium tuberculosis | 37% id,
89% cov |
O15864: chorismate synthase (EC 4.2.3.5) from Plasmodium falciparum | 41% id,
33% cov |
O15864: chorismate synthase (EC 4.2.3.5) from Plasmodium falciparum | 40% id,
17% cov |
O15864: chorismate synthase (EC 4.2.3.5) from Plasmodium falciparum | 43% id,
14% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory