Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 38 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1837: lactoylglutathione lyase (RefSeq)
is similar to:

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC from Escherichia coli
GloA / b1651: glyoxalase I (EC from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC from Shigella flexneri
gloA / P0AC81: glyoxalase I (EC from Escherichia coli
P0AC81: lactoylglutathione lyase (EC from Escherichia coli

68% id,
99% cov

Q9HY85: lactoylglutathione lyase (EC from Pseudomonas aeruginosa

64% id,
99% cov

P0A0T3: lactoylglutathione lyase (EC from Neisseria meningitidis

60% id,
93% cov


Sama_3593: AraC family transcriptional regulator (RefSeq)
is similar to:

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC from Arabidopsis thaliana

32% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory