Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 17 curated entries in PaperBLAST's database that match '5.2.1.2'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2218: maleylacetoacetate isomerase (RefSeq)
is similar to:
PaperBLAST

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

67% id,
100% cov

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

56% id,
98% cov

Ac3H11_2306: Maleylacetoacetate isomerase (EC 5.2.1.2) from Acidovorax sp.

47% id,
100% cov

More...

Sama_2509: glutathione S-transferase-like protein (RefSeq)
is similar to:
PaperBLAST

Pf6N2E2_5292: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

28% id,
99% cov

AO353_15560: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

27% id,
99% cov

AO356_16835: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas fluorescens

38% id,
45% cov

Sama_1087: glutathione S-transferase family protein (RefSeq)
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

25% id,
82% cov

Sama_0682: putative glutathione S-transferase (RefSeq)
is similar to:
PaperBLAST

MAAI_RAT / P57113: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Rattus norvegicus

25% id,
81% cov

MAAI_HUMAN / O43708: Maleylacetoacetate isomerase; MAAI; GSTZ1-1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Homo sapiens
GSTZ1 / O43708: maleylacetoacetate isomerase/glutathione transferase ζ monomer (EC 2.5.1.18; EC 5.2.1.2) from Homo sapiens
O43708: glutathione transferase (EC 2.5.1.18); maleylacetoacetate isomerase (EC 5.2.1.2) from Homo sapiens

23% id,
81% cov

MAAI1_DROME / Q9VHD3: Probable maleylacetoacetate isomerase 1; MAAI 1; Glutathione S-transferase zeta 1; EC 5.2.1.2; EC 2.5.1.18 from Drosophila melanogaster

24% id,
54% cov

Sama_3018: stringent starvation protein A (RefSeq)
is similar to:
PaperBLAST

Psest_3511: Maleylacetoacetate isomerase (EC 5.2.1.2) from Pseudomonas stutzeri

38% id,
47% cov

SO1671: Maleylacetoacetate isomerase (EC 5.2.1.2) from Shewanella oneidensis

40% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory