Searching in Shewanella amazonensis SB2B (SB2B)
Found 13 curated entries in PaperBLAST's database that match '6.2.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_1934: long-chain-fatty-acid--CoA ligase (RefSeq) is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 32% id, 96% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 90% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 32% id, 66% cov |
| Sama_2897: long-chain-fatty-acid--CoA ligase (RefSeq) is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 93% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 31% id, 86% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 90% cov |
| Sama_1904: AMP-binding domain protein (RefSeq) is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 91% cov |
| Sama_0261: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 49% cov |
| Sama_3571: AMP-binding family protein (RefSeq) is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 33% id, 37% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 44% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 31% id, 35% cov |
| Sama_1364: acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 28% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3443673-3445316 (frame +3) on 248323 is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 97% cov |
Lawrence Berkeley National Laboratory