Curated BLAST
Searching in Shewanella amazonensis SB2B (SB2B)
Found 14 curated entries in PaperBLAST's database that match '6.3.1.11' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_2644: glutamate--ammonia ligase (RefSeq)
is similar to: | PaperBLAST |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 85% id,
100% cov |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 55% id,
100% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 34% id,
100% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 35% id,
97% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 34% id,
97% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 34% id,
97% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 34% id,
97% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 34% id,
97% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 34% id,
97% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 35% id,
91% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 35% id,
91% cov |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 28% id,
97% cov |
More... |
Sama_1174: glutamate--ammonia ligase (RefSeq)
is similar to: | PaperBLAST |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 42% id,
99% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 42% id,
99% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 43% id,
97% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 43% id,
97% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 42% id,
97% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 42% id,
97% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 42% id,
97% cov |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 38% id,
99% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 39% id,
95% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 38% id,
96% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 34% id,
99% cov |
More... |
Sama_3416: glutamine synthetase (RefSeq)
is similar to: | PaperBLAST |
GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Haloferax mediterranei | 31% id,
95% cov |
BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Burkholderia phytofirmans | 30% id,
88% cov |
PUUA_ECOLI / P78061: Gamma-glutamylputrescine synthetase PuuA; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC 6.3.1.11 from Escherichia coli
YcjK / b1297: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli
puuA / P78061: glutamate-putrescine ligase (EC 6.3.1.11) from Escherichia coli | 26% id,
89% cov |
BWI76_RS10710: Glutamate--putrescine ligase (EC 6.3.1.11) from Klebsiella michiganensis | 26% id,
89% cov |
Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id,
63% cov |
Pf6N2E2_4509: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 32% id,
63% cov |
SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis | 30% id,
64% cov |
AO353_08595: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id,
58% cov |
PfGW456L13_925: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id,
58% cov |
PS417_27140: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas simiae | 33% id,
58% cov |
AO356_13135: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens | 33% id,
58% cov |
Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri | 32% id,
58% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory