Searching in Shewanella amazonensis SB2B (SB2B)
Found 9 curated entries in PaperBLAST's database that match '6.3.2.43' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_1999: ribosomal protein S6 modification protein, putative (RefSeq) is similar to: | PaperBLAST |
LYSX_SACS2 / Q7SI95: Alpha-aminoadipate--LysW ligase LysX; AAA--LysW ligase LysX; EC 6.3.2.43 from Saccharolobus solfataricus | 30% id, 75% cov |
Sama_1157: glutathione synthase (RefSeq) is similar to: | PaperBLAST |
LYSX_SACS2 / Q7SI95: Alpha-aminoadipate--LysW ligase LysX; AAA--LysW ligase LysX; EC 6.3.2.43 from Saccharolobus solfataricus | 26% id, 71% cov |
Sama_2877: lysyl-tRNA synthetase (RefSeq) is similar to: | PaperBLAST |
A5U2Z7: [amino group carrier protein]-L-2-aminoadipate ligase (EC 6.3.2.43) from Mycobacterium tuberculosis | 38% id, 38% cov |
Sama_2503: carbamoyl phosphate synthase large subunit (RefSeq) is similar to: | PaperBLAST |
LYSX_THET8 / Q5SH23: Alpha-aminoadipate--LysW ligase LysX; AAA--LysW ligase LysX; EC 6.3.2.43 from Thermus thermophilus | 30% id, 40% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
3416446-3418041 (frame -3) on 248323 is similar to: | PaperBLAST |
A5U2Z7: [amino group carrier protein]-L-2-aminoadipate ligase (EC 6.3.2.43) from Mycobacterium tuberculosis | 35% id, 45% cov |
Lawrence Berkeley National Laboratory