Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1662: alpha amylase, catalytic region (RefSeq)
is similar to:

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

35% id,
91% cov

Sama_1660: alpha amylase, catalytic region (RefSeq)
is similar to:

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

28% id,
32% cov

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

30% id,
29% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

28% id,
31% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory