Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b20749: D-mannonate oxidoreductase
is similar to:
PaperBLAST

MTLD_ECOLI / P09424: Mannitol-1-phosphate 5-dehydrogenase; EC 1.1.1.17 from Escherichia coli
MtlD / b3600: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
mtlD / P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli
P09424: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Escherichia coli

28% id,
81% cov

I3E3X0: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Bacillus methanolicus

25% id,
80% cov

SMc01501: mannitol 2-dehydrogenase
is similar to:
PaperBLAST

A8YYC5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Staphylococcus aureus

27% id,
61% cov

SM_b20747: hypothetical protein
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

24% id,
30% cov

SM_b21214: 2-deoxyglucose-6-phosphate phosphatase
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

26% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory