Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 13 curated entries in PaperBLAST's database that match '1.1.1.283' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00101: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

36% id,
95% cov

Q6IMN8: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Dictyostelium discoideum

31% id,
94% cov

P38715: methylglyoxal reductase (NADPH) (EC 1.1.1.283); D-xylose reductase (EC 1.1.1.307) from Saccharomyces cerevisiae

27% id,
94% cov

More...

SMc01429: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

36% id,
91% cov

Q6IMN8: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Dictyostelium discoideum

29% id,
93% cov

SMa1410: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

37% id,
88% cov

Q6IMN8: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Dictyostelium discoideum

28% id,
89% cov

P38715: methylglyoxal reductase (NADPH) (EC 1.1.1.283); D-xylose reductase (EC 1.1.1.307) from Saccharomyces cerevisiae

24% id,
83% cov

More...

SM_b20500: aldoketo reductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

30% id,
67% cov

SMc00374: oxidoreductase transmembrane protein
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

31% id,
64% cov

SMc04322: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

30% id,
60% cov

SMc00570: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

26% id,
70% cov

C4R5F8: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Komagataella phaffii

26% id,
65% cov

SMc00368: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

31% id,
40% cov

SMa1403: oxidoreductase
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

36% id,
27% cov

SMa2313: Oxidoreductase
is similar to:
PaperBLAST

C4R5F8: methylglyoxal reductase (NADPH) (EC 1.1.1.283) from Komagataella phaffii

29% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

328157-329227 (frame -3) on NC_003047
is similar to:
PaperBLAST

GR_BACSU / O32210: Glyoxal reductase; GR; Methylglyoxal reductase; EC 1.1.1.-; EC 1.1.1.283 from Bacillus subtilis
yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis
Also see hits to annotated proteins above

29% id,
71% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory