Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b20500: aldoketo reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

44% id,
92% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

29% id,
48% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

27% id,
50% cov

More...

SMc00101: oxidoreductase
is similar to:
PaperBLAST

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

33% id,
95% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

31% id,
96% cov

S4WCW2: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

31% id,
96% cov

More...

SMc04056: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
94% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

27% id,
54% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

22% id,
55% cov

SMa2077: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
93% cov

XYL1_PICST / P31867: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Scheffersomyces stipitis
XYL1 / P31867: NAD(P)H-dependent D-xylose reductase (EC 1.1.1.21; EC 1.1.1.307) from Scheffersomyces stipitis
P31867: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces stipitis

25% id,
60% cov

SMc00570: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

30% id,
94% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

24% id,
33% cov

SMa0563: aldehyde or keto oxidase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
81% cov

SMa1410: oxidoreductase
is similar to:
PaperBLAST

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

28% id,
97% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

28% id,
89% cov

C5J3R6: D-xylose reductase (EC 1.1.1.307) from Rasamsonia emersonii

28% id,
89% cov

More...

SMc04322: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
87% cov

SMc00374: oxidoreductase transmembrane protein
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
87% cov

SM_b20648: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

34% id,
78% cov

SMc04252: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

28% id,
91% cov

SMc01702: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
77% cov

SMc01429: oxidoreductase
is similar to:
PaperBLAST

I7HD84: D-xylose reductase (EC 1.1.1.307) from Rhizomucor pusillus

26% id,
91% cov

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

39% id,
57% cov

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

33% id,
49% cov

More...

SMa2313: Oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

25% id,
89% cov

SMc00368: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

34% id,
62% cov

A0A0M4HL56: D-xylose reductase (EC 1.1.1.307) from Debaryomyces nepalensis

27% id,
42% cov

SMc00369: oxidoreductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

36% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3058971-3060086 (frame +3) on NC_003047
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis
Also see hits to annotated proteins above

30% id,
96% cov

2223851-2224933 (frame +2) on NC_003047
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis
Also see hits to annotated proteins above

30% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory