Curated BLAST for Genomes


Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 4 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b20749: D-mannonate oxidoreductase
is similar to:

CA265_RS19880: Altronate oxidoreductase (EC from Pedobacter sp.

27% id,
95% cov

UxaB / b1521: tagaturonate reductase (EC from Escherichia coli
uxaB / P0A6L7: tagaturonate reductase (EC from Escherichia coli

25% id,
99% cov

A9QSF6: tagaturonate reductase (EC from Lactococcus lactis

27% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory