Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.77' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02038: glycerol dehydrogenase
is similar to:
PaperBLAST

Q9HHR2: glycolaldehyde reductase (EC 1.1.1.77) from Halobacterium salinarum

43% id,
99% cov

SMa0263: alcohol dehydrogenase
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

34% id,
99% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

32% id,
97% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

30% id,
90% cov

SMc01582: alcohol dehydrogenase
is similar to:
PaperBLAST

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

33% id,
97% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

32% id,
99% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

31% id,
96% cov

SM_b20147: alcohol dehydrogenase
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

31% id,
98% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

31% id,
97% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

28% id,
97% cov

SM_b21228: nucleotide sugar epimerase dehydratase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

24% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory