Curated BLAST for Genomes


Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 30 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02677: pyrroline-5-carboxylate reductase
is similar to:

P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC from Pseudomonas aeruginosa

42% id,
98% cov

CCNA_00528: pyrroline-5-carboxylate reductase (EC from Caulobacter crescentus

39% id,
99% cov

DVU2332: pyrroline-5-carboxylate reductase (EC from Desulfovibrio vulgaris

37% id,
97% cov


SM_b20003: pyrroline-5-carboxylate reductase
is similar to:

Shew_1136: pyrroline-5-carboxylate reductase (EC from Shewanella loihica

24% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory