Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 14 curated entries in PaperBLAST's database that match '1.5.1.34' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMa1191: nitric oxide dioxygenase
is similar to:
PaperBLAST

Hmp / b2552: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli
hmp / P24232: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli

45% id,
99% cov

SMa0752: dioxygenase reductase subunit
is similar to:
PaperBLAST

Hmp / b2552: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli
hmp / P24232: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli

25% id,
61% cov

SMa1735: oxidoreductase
is similar to:
PaperBLAST

Hmp / b2552: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli
hmp / P24232: nitric oxide dioxygenase (EC 1.14.12.17; EC 1.5.1.34) from Escherichia coli

27% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory