Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 10 curated entries in PaperBLAST's database that match '2.3.1.117' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01732: 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
is similar to:
PaperBLAST

DAPD_ECOLI / P0A9D8: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA: tetrahydrodipicolinate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Escherichia coli
Ssa / b0166: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli
dapD / P0A9D8: tetrahydrodipicolinate succinylase (EC 2.3.1.117) from Escherichia coli

63% id,
99% cov

Q8X8Y7: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Escherichia coli

62% id,
99% cov

DAPD_UNKP / P56220: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase; EC 2.3.1.117 from Unknown prokaryotic

62% id,
99% cov

More...

SM_b21427: acetyltransferase
is similar to:
PaperBLAST

P31852: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) from Pseudomonas amygdali

28% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory