Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 14 curated entries in PaperBLAST's database that match '2.3.1.29' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01565: 2-amino-3-ketobutyrate CoA ligase
is similar to:
PaperBLAST

KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli
Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli
kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli

68% id,
100% cov

BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis

68% id,
100% cov

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

67% id,
99% cov

More...

SMc03104: 5-aminolevulinate synthase
is similar to:
PaperBLAST

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

36% id,
99% cov

KBL_HUMAN / O75600: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Homo sapiens
GCAT / O75600: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Homo sapiens

36% id,
92% cov

Shewana3_4104: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Shewanella sp.

33% id,
99% cov

More...

SMc02272: acyl-transferase transferase
is similar to:
PaperBLAST

KBL_BOVIN / Q0P5L8: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; Aminoacetone synthase; Glycine acetyltransferase; EC 2.3.1.29 from Bos taurus

33% id,
95% cov

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

36% id,
88% cov

RR42_RS28295: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Cupriavidus basilensis

32% id,
95% cov

More...

SMa0972: hypothetical protein
is similar to:
PaperBLAST

BWI76_RS27255: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) from Klebsiella michiganensis

28% id,
98% cov

KBL_ECOLI / P0AB77: 2-amino-3-ketobutyrate coenzyme A ligase; AKB ligase; Glycine acetyltransferase; EC 2.3.1.29 from Escherichia coli
Kbl / b3617: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
kbl: 2-amino-3-ketobutyrate coenzyme A ligase; EC 2.3.1.29 from Escherichia coli
kbl / P0AB77: 2-amino-3-ketobutyrate CoA ligase (EC 2.3.1.29) from Escherichia coli
P0AB77: glycine C-acetyltransferase (EC 2.3.1.29) from Escherichia coli

29% id,
94% cov

BIKB_THET8 / Q5SHZ8: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; Glycine acetyltransferase; EC 2.3.1.29; EC 2.3.1.47 from Thermus thermophilus

30% id,
86% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory