Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02546: alpha-isopropylmalate/homocitrate synthase family transferase
is similar to:
PaperBLAST

P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp.

31% id,
95% cov

HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii

28% id,
100% cov

HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius
Q4J989: homocitrate synthase (EC 2.3.3.14) from Sulfolobus acidocaldarius

27% id,
98% cov

More...

SMc02717: 2-isopropylmalate synthase
is similar to:
PaperBLAST

AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii

30% id,
90% cov

D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus

27% id,
94% cov

A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp.

24% id,
83% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory