Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 17 curated entries in PaperBLAST's database that match '2.4.2.18' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00235: anthranilate phosphoribosyltransferase
is similar to:
PaperBLAST

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

46% id,
99% cov

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

44% id,
90% cov

TRPD_MYCTU / P9WFX5: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis
A5U4M0: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis
P9WFX5: anthranilate phosphoribosyltransferase (EC 2.4.2.18) from Mycobacterium tuberculosis

43% id,
91% cov

More...

SMc02725: anthranilate synthase
is similar to:
PaperBLAST

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

38% id,
35% cov

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

37% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory