Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc04214: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
is similar to:
PaperBLAST

cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp.
P29935: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Pseudomonas denitrificans

95% id,
100% cov

cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica

42% id,
92% cov

cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum

41% id,
93% cov

More...

SMc00395: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
is similar to:
PaperBLAST

Q8YBL1: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28); methylthioadenosine nucleosidase (EC 3.2.2.16) from Brucella melitensis

68% id,
98% cov

SMc01206: queuine tRNA-ribosyltransferase
is similar to:
PaperBLAST

TGT_ZYMMO / P28720: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Zymomonas mobilis
P28720: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29); tRNA-guanosine34 queuine transglycosylase (EC 2.4.2.64) from Zymomonas mobilis

59% id,
94% cov

TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli
Tgt: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
tgt / P0A847: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
P0A847: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Escherichia coli

53% id,
99% cov

Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri

53% id,
99% cov

More...

SMc04122: thymidine phosphorylase
is similar to:
PaperBLAST

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli

54% id,
99% cov

A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei

45% id,
99% cov

PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis
pdp / GB|CAB15976.2: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Bacillus subtilis

44% id,
98% cov

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SMc00945: xanthine-guanine phosphoribosyltransferase
is similar to:
PaperBLAST

XGPT_ECOLI / P0A9M5: Xanthine-guanine phosphoribosyltransferase; XGPRT; Xanthine phosphoribosyltransferase; EC 2.4.2.-; EC 2.4.2.22 from Escherichia coli
Gxu / b0238: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli
gpt / GB|AAN41945.1: xanthine phosphoribosyltransferase; EC 2.4.2.22 from Shigella sonnei
gpt / P0A9M5: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli

48% id,
99% cov

SMc02683: hypothetical protein
is similar to:
PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

40% id,
89% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

33% id,
92% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

33% id,
92% cov

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SMc00719: hypoxanthine-guanine phosphoribosyltransferase
is similar to:
PaperBLAST

HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus

31% id,
91% cov

HGXR_PLAFG / P20035: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Plasmodium falciparum

29% id,
78% cov

Q8IJS1: xanthine phosphoribosyltransferase (EC 2.4.2.22); hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) from Plasmodium falciparum

29% id,
78% cov

SMc04123: purine nucleoside phosphorylase
is similar to:
PaperBLAST

MTAP_HUMAN / Q13126: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Homo sapiens
MTAP / Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens
Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens

28% id,
83% cov

MTAP_RHORT / Q2RXH9: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; EC 2.4.2.28 from Rhodospirillum rubrum

32% id,
70% cov

MTAP_BOVIN / Q3MHF7: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Bos taurus

27% id,
83% cov

More...

SMc00166: oxidoreductase NAD protein
is similar to:
PaperBLAST

D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii

40% id,
34% cov

SMc00235: anthranilate phosphoribosyltransferase
is similar to:
PaperBLAST

TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens

29% id,
28% cov

SM_b21521: hypothetical protein
is similar to:
PaperBLAST

XYLT1_HUMAN / Q86Y38: Xylosyltransferase 1; Peptide O-xylosyltransferase 1; Xylosyltransferase I; XT-I; XylT-I; EC 2.4.2.26 from Homo sapiens
CAD62248.1: peptide O-β-xylosyltransferase I (XT-I;XylT1;XYLT1) (EC 2.4.2.26)
XYLT1 / Q86Y38: xylosyltransferase 1 (EC 2.4.2.26) from Homo sapiens
Q86Y38: protein xylosyltransferase (EC 2.4.2.26) from Homo sapiens

47% id,
5% cov

SMc04357: hypothetical protein
is similar to:
PaperBLAST

XYLT1_HUMAN / Q86Y38: Xylosyltransferase 1; Peptide O-xylosyltransferase 1; Xylosyltransferase I; XT-I; XylT-I; EC 2.4.2.26 from Homo sapiens
CAD62248.1: peptide O-β-xylosyltransferase I (XT-I;XylT1;XYLT1) (EC 2.4.2.26)
XYLT1 / Q86Y38: xylosyltransferase 1 (EC 2.4.2.26) from Homo sapiens
Q86Y38: protein xylosyltransferase (EC 2.4.2.26) from Homo sapiens

36% id,
6% cov

SMc02070: hypothetical protein
is similar to:
PaperBLAST

XYLT_DROME / Q7KVA1: Xylosyltransferase oxt; Imaginal disk type I; Peptide O-xylosyltransferase; EC 2.4.2.26 from Drosophila melanogaster
CAD23246.1: peptide O-β-xylosyltransferase (CG17771;CG17772;Anon-i2;Oxt) (EC 2.4.2.26)

33% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory