Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02595: cystathionine gamma-synthase
is similar to:		 PaperBLAST

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 53% id,
98% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 45% id,
96% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 43% id,
96% cov

More...

SMc02217: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

 44% id,
95% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 37% id,
97% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 36% id,
96% cov

More...

SMc01976: hypothetical protein
is similar to:		 PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 38% id,
97% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 37% id,
96% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 36% id,
93% cov

More...

SMc01666: methionine gamma-lyase
is similar to:		 PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 37% id,
96% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 35% id,
99% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 34% id,
97% cov

More...

SMc01809: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

 36% id,
98% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

 33% id,
98% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 41% id,
54% cov

More...

SMc02117: cystathionine beta-lyase
is similar to:		 PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 34% id,
100% cov

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 35% id,
99% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 34% id,
99% cov

More...

SMc00710: histidinol-phosphate aminotransferase
is similar to:		 PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 23% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory