Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMa0514: gluconate kinase
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

51% id,
92% cov

GntK / b3437: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli
gntK: gluconokinase; EC 2.7.1.12 from Escherichia coli
gntK / P46859: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli

47% id,
87% cov

GCNK_GLUOX / Q5FQ97: Gluconokinase; Gluconate kinase; EC 2.7.1.12 from Gluconobacter oxydans

42% id,
96% cov

More...

SM_b21119: gluconokinase
is similar to:
PaperBLAST

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

49% id,
95% cov

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

50% id,
91% cov

GCNK_GLUOX / Q5FQ97: Gluconokinase; Gluconate kinase; EC 2.7.1.12 from Gluconobacter oxydans

45% id,
98% cov

More...

SMc03854: cell division protein
is similar to:
PaperBLAST

GCNK_GLUOX / Q5FQ97: Gluconokinase; Gluconate kinase; EC 2.7.1.12 from Gluconobacter oxydans

25% id,
93% cov

SM_b20034: ABC transporter
is similar to:
PaperBLAST

Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri

36% id,
33% cov

SM_b20373: TRAP dicarboxylate transporter
is similar to:
PaperBLAST

Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri

24% id,
41% cov

SM_b20296: permease
is similar to:
PaperBLAST

Psest_2123: fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter from Pseudomonas stutzeri

26% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory