Curated BLAST for Genomes


Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 15 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b21184: acetate kinase
is similar to:

ackA / P71104: acetate kinase monomer (EC from Clostridium acetobutylicum

38% id,
98% cov

AckA / b2296: acetate kinase (EC; EC; EC; EC from Escherichia coli
ackA / P0A6A3: acetate kinase (EC; EC from Escherichia coli

39% id,
98% cov

ackA / E3PRH0: acetate kinase (EC from Acetoanaerobium sticklandii

37% id,
99% cov


SMc04002: phosphoribosylaminoimidazole carboxylase ATPase subunit
is similar to:

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli

28% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory