Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 5 curated entries in PaperBLAST's database that match '3.1.1.24' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b20579: beta-ketoadipate enol-lactone hydrolase
is similar to:
PaperBLAST

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

38% id,
98% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

36% id,
98% cov

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

35% id,
94% cov

SMc04308: oxidoreductase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

28% id,
97% cov

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

32% id,
59% cov

SMa1727: alpha/beta hydrolase
is similar to:
PaperBLAST

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

26% id,
97% cov

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

25% id,
59% cov

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

30% id,
48% cov

SMc01944: haloperoxidase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

28% id,
88% cov

SMa1327: hydrolase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

27% id,
87% cov

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

28% id,
83% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

25% id,
89% cov

More...

SM_b20860: non-heme haloperodidase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

27% id,
81% cov

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

28% id,
62% cov

SMa1809: Non-heme haloperoxidase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

28% id,
69% cov

SM_b20578: gamma carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

46% id,
30% cov

SMa0559: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

25% id,
47% cov

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

33% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory