Curated BLAST for Genomes


Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03160: beta-glucosidase
is similar to:

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC|

33% id,
99% cov

LPH_SHEEP / W5PLZ6: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC; EC from Ovis aries

35% id,
25% cov

CAA30801.1: lactase-phlorizin hydrolase (Lct) (EC|

35% id,
25% cov


SM_b21655: beta-galactosidase
is similar to:

LacZ / b0344: β-galactosidase (EC from Escherichia coli
lacZ / P00722: β-galactosidase (EC from Escherichia coli

28% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory