Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03064: alpha-glucosidase
is similar to:
PaperBLAST

Q9Z3R8: alpha-glucosidase (EC 3.2.1.20) from Sinorhizobium meliloti

100% id,
100% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

69% id,
92% cov

BAL49684.1: α-glucosidase (AglA;HaG) (EC 3.2.1.20)

55% id,
100% cov

More...

SMc01532: alpha-glycosylase
is similar to:
PaperBLAST

Q9Z3R8: alpha-glucosidase (EC 3.2.1.20) from Sinorhizobium meliloti

63% id,
97% cov

BAL49684.1: α-glucosidase (AglA;HaG) (EC 3.2.1.20)

59% id,
97% cov

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

58% id,
95% cov

More...

SM_b21648: alpha-galactosidase (melibiase) protein
is similar to:
PaperBLAST

PALH_ERWRD / Q9AI65: Alpha-glucosidase; EC 3.2.1.20 from Erwinia rhapontici
Q9AI65: alpha-glucosidase (EC 3.2.1.20); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Erwinia rhapontici

28% id,
99% cov

AAK28734.1: α-glucosidase (PalH) (EC 3.2.1.20)

28% id,
97% cov

CAA08868.1: α-glucosidase (AglA) (EC 3.2.1.20)

26% id,
62% cov

More...

SM_b20099: maltose alpha-D-glucosyltransferase
is similar to:
PaperBLAST

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)

31% id,
88% cov

CAA60857.1: α-glucosidase (Agm1) (EC 3.2.1.20)

34% id,
66% cov

ACM89183.1: α-1,6-glucosidase 2 (Agl2; Bbr_0559) (EC 3.2.1.10|3.2.1.20)

34% id,
65% cov

More...

SM_b21107: mandelate racemase or evolutionary related enzyme of the mandelate racemase muconate lactonizing enzyme family protein
is similar to:
PaperBLAST

Q2PCE2: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

24% id,
87% cov

SM_b21643: alpha-galactosidase (melibiase) protein
is similar to:
PaperBLAST

PALH_ERWRD / Q9AI65: Alpha-glucosidase; EC 3.2.1.20 from Erwinia rhapontici
Q9AI65: alpha-glucosidase (EC 3.2.1.20); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Erwinia rhapontici

32% id,
48% cov

AAK28734.1: α-glucosidase (PalH) (EC 3.2.1.20)

32% id,
47% cov

CAA08868.1: α-glucosidase (AglA) (EC 3.2.1.20)

28% id,
51% cov

More...

SM_b21463: glycosyl hydrolase, 6-phospho-beta-glucosidase
is similar to:
PaperBLAST

PALH_ERWRD / Q9AI65: Alpha-glucosidase; EC 3.2.1.20 from Erwinia rhapontici
Q9AI65: alpha-glucosidase (EC 3.2.1.20); 6-phospho-beta-glucosidase (EC 3.2.1.86) from Erwinia rhapontici

27% id,
44% cov

AAK28734.1: α-glucosidase (PalH) (EC 3.2.1.20)

27% id,
43% cov

SM_b21447: 1,4-alpha-glucan-branching protein
is similar to:
PaperBLAST

AKA95141.1: α-glucosidase (TtAG) (EC 3.2.1.20)

30% id,
30% cov

AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20|3.2.1.28)

29% id,
30% cov

BAD70304.1: α-glucosidase (TTHA0481) (EC 3.2.1.20)
Q5SL12: alpha-glucosidase (EC 3.2.1.20) from Thermus thermophilus

31% id,
25% cov

More...

SM_b20574: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)

34% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

106912-108753 (frame +1) on NC_003078
is similar to:
PaperBLAST

BAI67603.1: α-glucosidase (CmmB) (EC 3.2.1.20)
Also see hits to annotated proteins above

31% id,
91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory