Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 325 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 253 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b21655: beta-galactosidase
is similar to:
PaperBLAST

SM_b21655: Beta-galactosidase (EC 3.2.1.23) from Sinorhizobium meliloti

100% id,
100% cov

AAA26296.1: β-galactosidase Z (LacZ) (EC 3.2.1.23)

80% id,
100% cov

ACY69080.1: β-galactosidase (BgaL;(Par?DG) (EC 3.2.1.23)

62% id,
98% cov

More...

SM_b20966: beta-galactosidase
is similar to:
PaperBLAST

ABI35985.1: β-galactosidase (EC 3.2.1.23)

52% id,
99% cov

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

52% id,
99% cov

BGAL_THEBO / Q9X6C6: Beta-galactosidase BgaT; Beta-gal; EC 3.2.1.23 from Thermus brockianus

51% id,
99% cov

More...

SMc03160: beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

48% id,
98% cov

AEQ38581.1: β-galactosidase (Mbgl) (EC 3.2.1.23)

40% id,
97% cov

ACL74759.1: cellodextrin glucohydrolase (Ccel_0374) (EC 3.2.1.21|3.2.1.23|3.2.1.74)

39% id,
98% cov

More...

SMc01460: hypothetical protein
is similar to:
PaperBLAST

Q8DR24: beta-galactosidase (EC 3.2.1.23) from Streptococcus pneumoniae

31% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory