Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 332 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 256 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b21655: beta-galactosidase
is similar to:
PaperBLAST

SM_b21655: Beta-galactosidase (EC 3.2.1.23) from Sinorhizobium meliloti

100% id,
100% cov

AAA26296.1: β-galactosidase Z (LacZ) (EC 3.2.1.23)

80% id,
100% cov

ACY69080.1: β-galactosidase (BgaL;(Par?DG) (EC 3.2.1.23)

62% id,
98% cov

More...

SM_b20966: beta-galactosidase
is similar to:
PaperBLAST

ABI35985.1: β-galactosidase (EC 3.2.1.23)

52% id,
99% cov

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

52% id,
99% cov

BGAL_THEBO / Q9X6C6: Beta-galactosidase BgaT; Beta-gal; EC 3.2.1.23 from Thermus brockianus

51% id,
99% cov

More...

SMc03160: beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

48% id,
98% cov

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

44% id,
96% cov

GH1A_CALOW / E4Q361: Multifunctional glycoside hydrolase; Multifunctional GH; CoGH1A; EC 3.2.1.21; EC 3.2.1.23; EC 3.2.1.37; EC 3.2.1.74; EC 3.2.1.91 from Caldicellulosiruptor owensensis

41% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory