Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.93' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03064: alpha-glucosidase
is similar to:
PaperBLAST

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

37% id,
93% cov

AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens

36% id,
93% cov

AAG31032.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

35% id,
92% cov

More...

SMc01532: alpha-glycosylase
is similar to:
PaperBLAST

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93)

36% id,
92% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

35% id,
93% cov

AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens

36% id,
93% cov

More...

SM_b20099: maltose alpha-D-glucosyltransferase
is similar to:
PaperBLAST

BAB38639.1: trehalose 6-P hydrolase (ECs5216) (EC 3.2.1.93)

38% id,
50% cov

TREC_ECOLI / P28904: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; EC 3.2.1.93 from Escherichia coli
TreE / b4239: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli
AAC77196.1: trehalose-6-phosphate hydrolase (TreC) (EC 3.2.1.93)
treC / P28904: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Escherichia coli

38% id,
50% cov

BAG86620.1: trehalose-6-phosphate hydrolase (TreC;KP1_0530) (EC 3.2.1.93)

38% id,
50% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory