Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00035: hypothetical protein
is similar to:
PaperBLAST

PGA1_c36210: L-asparaginase (EC 3.5.1.1) from Phaeobacter inhibens

41% id,
99% cov

W0KM71: asparaginase (EC 3.5.1.1) from Nocardiopsis alba

34% id,
86% cov

Q9RFN5: asparaginase (EC 3.5.1.1) from Rhizobium etli

32% id,
91% cov

SMc01158: hypothetical protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

27% id,
33% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

29% id,
26% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

32% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory