Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03091: arginase
is similar to:		 PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

 51% id,
94% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

 47% id,
99% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.

 51% id,
82% cov

More...

SMc01967: agmatinase
is similar to:		 PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

 44% id,
85% cov

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

 40% id,
91% cov

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

 33% id,
96% cov

More...

SMc01802: agmatinase
is similar to:		 PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

 38% id,
82% cov

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

 35% id,
82% cov

ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana
arginase / P46637: arginase (EC 3.5.3.1) from Arabidopsis thaliana

 28% id,
96% cov

More...

SMa1711: arginase
is similar to:		 PaperBLAST

A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans

 29% id,
98% cov

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

 28% id,
98% cov

ARGI_BACSU / P39138: Arginase; EC 3.5.3.1 from Bacillus subtilis
argI / P39138: arginase (EC 3.5.3.1) from Bacillus subtilis
P39138: arginase (EC 3.5.3.1) from Bacillus subtilis

 27% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3256881-3257978 (frame +3) on NC_003047
is similar to:		 PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum
Also see hits to annotated proteins above

 50% id,
97% cov

Q4A3J2: arginase (EC 3.5.3.1) from Cyprinus carpio
Also see hits to annotated proteins above

 36% id,
90% cov

ARGI_KLULA / Q6CLS8: Arginase; EC 3.5.3.1 from Kluyveromyces lactis
Also see hits to annotated proteins above

 34% id,
91% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory