Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 5 curated entries in PaperBLAST's database that match '3.5.3.8'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01967: agmatinase
is similar to:
PaperBLAST

Q4DSA0: formimidoylglutamase (EC 3.5.3.8) from Trypanosoma cruzi

29% id,
83% cov

SMc01802: agmatinase
is similar to:
PaperBLAST

HUTG_BACSU / P42068: Formimidoylglutamase; Formiminoglutamase; Formiminoglutamate hydrolase; N-formimino-L-glutamate formiminohydrolase; EC 3.5.3.8 from Bacillus subtilis

25% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory