Curated BLAST
Searching in Sinorhizobium meliloti 1021 (Smeli)
Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query
SM_b21300: deoxyribose-phosphate aldolase
is similar to: | PaperBLAST |
DEOC_HUMAN / Q9Y315: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Homo sapiens
Q9Y315: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Homo sapiens | 60% id,
99% cov |
Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae | 40% id,
95% cov |
DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli
Tlr / b4381: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli
deoC / P0A6L0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Escherichia coli | 40% id,
93% cov |
DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium | 39% id,
93% cov |
A0A125YLW2: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Toxoplasma gondii | 33% id,
92% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 30% id,
95% cov |
DEOC_STRP6 / Q5XA31: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Streptococcus pyogenes | 32% id,
86% cov |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 28% id,
97% cov |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis
Q877I0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Thermococcus kodakarensis | 29% id,
94% cov |
DEOC_RHOE4 / C0ZUQ6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Rhodococcus erythropolis
C0ZUQ6: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Rhodococcus erythropolis | 30% id,
86% cov |
More... |
SMc02333: hypothetical protein
is similar to: | PaperBLAST |
DEOC_RHOE4 / C0ZUQ6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Rhodococcus erythropolis
C0ZUQ6: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Rhodococcus erythropolis | 38% id,
97% cov |
DEOC_PSEU2 / Q4ZMV1: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Pseudomonas syringae | 38% id,
95% cov |
deoC / C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp.
C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp. | 36% id,
97% cov |
DEOC_ACIB4 / B5IEU6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aciduliprofundum boonei | 37% id,
95% cov |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 36% id,
95% cov |
DEOC_BACSU / P39121: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Bacillus subtilis | 35% id,
94% cov |
DEOC_STRP6 / Q5XA31: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Streptococcus pyogenes | 34% id,
97% cov |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis
Q877I0: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Thermococcus kodakarensis | 34% id,
96% cov |
DEOC_THEMA / Q9X1P5: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermotoga maritima | 36% id,
86% cov |
D5AHU8: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus suis | 32% id,
95% cov |
Q9AIP7: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Streptococcus mutans | 42% id,
68% cov |
A0A1Q2T258: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Haloarcula japonica | 31% id,
91% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory