Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 8 curated entries in PaperBLAST's database that match '4.1.3.25' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03793: citrate lyase subunit beta
is similar to:
PaperBLAST

Q9I562: (S)-citramalyl-CoA lyase (EC 4.1.3.25) from Pseudomonas aeruginosa

33% id,
97% cov

MCAL_CERS4 / Q3J5L6: L-malyl-CoA/beta-methylmalyl-CoA lyase; (3S)-malyl-CoA/beta-methylmalyl-CoA lyase; (S)-citramalyl-CoA lyase; EC 4.1.3.24; EC 4.1.3.25 from Cereibacter sphaeroides

31% id,
97% cov

A0A172MLA1: (S)-citramalyl-CoA lyase (EC 4.1.3.25); (R)-citramalyl-CoA lyase (EC 4.1.3.46) from Aspergillus terreus

31% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory