Searching in Sinorhizobium meliloti 1021 (Smeli)
Found 21 curated entries in PaperBLAST's database that match '4.1.3.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query
| SMc02778: hydroxyacid aldolase is similar to: | PaperBLAST |
Q47098: 4-hydroxy-2-oxoheptanedioate aldolase (EC 4.1.2.52); 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Escherichia coli | 51% id, 99% cov |
BPHF_RHOJR / O05151: 4-hydroxy-2-oxovalerate aldolase; HOA; EC 4.1.3.39 from Rhodococcus jostii | 48% id, 98% cov |
| SMc02546: alpha-isopropylmalate/homocitrate synthase family transferase is similar to: | PaperBLAST |
P51017: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 27% id, 97% cov |
HOA_THET8 / Q53WI0: 4-hydroxy-2-oxovalerate aldolase; HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase; EC 4.1.3.39; EC 4.1.3.43 from Thermus thermophilus | 26% id, 96% cov |
HOA4_PARXL / P51015: 4-hydroxy-2-oxovalerate aldolase 4; HOA 4; 4-hydroxy-2-keto-pentanoic acid aldolase 4; 4-hydroxy-2-oxohexanoate aldolase; 4-hydroxy-2-oxopentanoate aldolase 4; EC 4.1.3.39; EC 4.1.3.43 from Paraburkholderia xenovorans | 25% id, 97% cov |
| SMc02717: 2-isopropylmalate synthase is similar to: | PaperBLAST |
P51017: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) from Pseudomonas putida | 29% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory