Searching in Sinorhizobium meliloti 1021 (Smeli)
Found 17 curated entries in PaperBLAST's database that match '4.1.3.4' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Sinorhizobium meliloti 1021, or try another query
| SM_b21125: hydroxymethylglutaryl-CoA lyase is similar to: | PaperBLAST |
SM_b21125: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Sinorhizobium meliloti | 100% id, 100% cov |
LIUE_PSEAE / Q9I2A0: 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase; HIHG-CoA lyase; HMG-CoA lyase; (S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase; 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA acetate-lyase; EC 4.1.3.26; EC 4.1.3.4 from Pseudomonas aeruginosa | 56% id, 91% cov |
HMGCL_RAT / P97519: Hydroxymethylglutaryl-CoA lyase, mitochondrial; HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase; EC 4.1.3.4 from Rattus norvegicus | 54% id, 85% cov |
| SMc02546: alpha-isopropylmalate/homocitrate synthase family transferase is similar to: | PaperBLAST |
HMGCL_HUMAN / P35914: Hydroxymethylglutaryl-CoA lyase, mitochondrial; HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase; EC 4.1.3.4 from Homo sapiens | 24% id, 87% cov |
| SM_b21126: enoyl-CoA hydratase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 35% id, 41% cov |
| SM_b21633: enoyl-CoA hydratase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 29% id, 43% cov |
| SMc00976: enoyl-CoA hydratase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 27% id, 38% cov |
| SMc01669: enoyl-CoA hydratase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 31% id, 30% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1213081-1214739 (frame +1) on NC_003047 is similar to: | PaperBLAST |
HMGCL_MOUSE / P38060: Hydroxymethylglutaryl-CoA lyase, mitochondrial; HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase; EC 4.1.3.4 from Mus musculus | 24% id, 87% cov |
HMGCL_RAT / P97519: Hydroxymethylglutaryl-CoA lyase, mitochondrial; HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase; EC 4.1.3.4 from Rattus norvegicus | 23% id, 87% cov |
Lawrence Berkeley National Laboratory