Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 58 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01153: enoyl-CoA hydratase
is similar to:
PaperBLAST

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

70% id,
100% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

69% id,
100% cov

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

66% id,
100% cov

More...

SM_b21633: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaG / MB|P77467: putative enoyl-CoA hydratase PaaG; EC 4.2.1.17 from Escherichia coli

59% id,
99% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

37% id,
95% cov

ECH14_MYCBO / P64019: Probable enoyl-CoA hydratase echA14; EC 4.2.1.17 from Mycobacterium bovis

36% id,
97% cov

More...

SMc01669: enoyl-CoA hydratase
is similar to:
PaperBLAST

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

39% id,
100% cov

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

38% id,
100% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

39% id,
100% cov

More...

SMc01641: carnitinyl-CoA dehydratase
is similar to:
PaperBLAST

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

39% id,
97% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

36% id,
98% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

36% id,
98% cov

More...

SMc04398: enoyl-CoA hydratase
is similar to:
PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

36% id,
99% cov

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

36% id,
96% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

35% id,
99% cov

More...

SMc02227: fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase
is similar to:
PaperBLAST

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

36% id,
100% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

36% id,
99% cov

fadB / Q88L02: FadB (EC 5.3.3.8; EC 1.1.1.35; EC 5.1.2.3; EC 4.2.1.17; EC 1.1.1.36) from Pseudomonas putida

35% id,
100% cov

More...

SMa1408: dehydratase
is similar to:
PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

35% id,
98% cov

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

35% id,
95% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

32% id,
98% cov

More...

SMc01806: enoyl-CoA hydratase
is similar to:
PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

35% id,
97% cov

PAAF_ECOLI / P76082: 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC 4.2.1.17 from Escherichia coli
YdbR / b1393: putative 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli
P76082: enoyl-CoA hydratase (EC 4.2.1.17) from Escherichia coli

33% id,
95% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

31% id,
98% cov

More...

SM_b20752: 3-hydroxyisobutyryl-CoA hydrolase
is similar to:
PaperBLAST

Q9SE41: enoyl-CoA hydratase (EC 4.2.1.17) from Avicennia marina

38% id,
84% cov

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

31% id,
80% cov

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

31% id,
74% cov

More...

SM_b21126: enoyl-CoA hydratase
is similar to:
PaperBLAST

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

34% id,
94% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

31% id,
99% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

29% id,
100% cov

More...

SMc00976: enoyl-CoA hydratase
is similar to:
PaperBLAST

FER4_USTMA / Q4PEN0: Enoyl-CoA isomerase/hydratase fer4; Fe-regulated protein 4; Ferrichrome A biosynthesis protein fer4; EC 4.2.1.17 from Ustilago maydis

29% id,
94% cov

ECH14_MYCBO / P64019: Probable enoyl-CoA hydratase echA14; EC 4.2.1.17 from Mycobacterium bovis

27% id,
95% cov

ECH17_MYCBO / Q7TXE1: Probable enoyl-CoA hydratase EchA17; EC 4.2.1.17 from Mycobacterium bovis
ECH17_MYCTU / P9WNN3: Probable enoyl-CoA hydratase EchA17; EC 4.2.1.17 from Mycobacterium tuberculosis

28% id,
90% cov

More...

SM_b21632: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

ECHP_HUMAN / Q08426: Peroxisomal bifunctional enzyme; PBE; PBFE; L-bifunctional protein; LBP; Multifunctional enzyme 1; MFE1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Homo sapiens
EHHADH / Q08426: peroxisomal bifunctional enzyme (EC 4.2.1.17; EC 1.1.1.35) from Homo sapiens

36% id,
61% cov

ECHP_MOUSE / Q9DBM2: Peroxisomal bifunctional enzyme; PBE; PBFE; L-peroxisomal bifunctional enzyme; L-PBE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP-1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Mus musculus

35% id,
61% cov

ECHP_RAT / P07896: Peroxisomal bifunctional enzyme; PBE; PBFE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Rattus norvegicus
Ehhadh / RF|NP_598290.1: noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus
P07896: enoyl-CoA hydratase (EC 4.2.1.17) from Rattus norvegicus

35% id,
61% cov

More...

SMc00727: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

39% id,
39% cov

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

38% id,
39% cov

Shewana3_0024: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella sp.

38% id,
39% cov

More...

SMc01638: bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase
is similar to:
PaperBLAST

ECHP_MOUSE / Q9DBM2: Peroxisomal bifunctional enzyme; PBE; PBFE; L-peroxisomal bifunctional enzyme; L-PBE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP-1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Mus musculus

27% id,
37% cov

ECHP_RAT / P07896: Peroxisomal bifunctional enzyme; PBE; PBFE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Rattus norvegicus
Ehhadh / RF|NP_598290.1: noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus
P07896: enoyl-CoA hydratase (EC 4.2.1.17) from Rattus norvegicus

29% id,
34% cov

FADB_ECOLI / P21177: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Escherichia coli
OldB / b3846: multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli
fadB / P21177: multifunctional enoyl-CoA hydratase, 3-hydroxyacyl-CoA epimerase, Δ3-cis- Δ2-trans-enoyl-CoA isomerase, L-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8; EC 5.1.2.3) from Escherichia coli

26% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory