Searching in Sinorhizobium meliloti 1021 (Smeli)
Found 9 curated entries in PaperBLAST's database that match '4.2.1.40' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query
| SMa0056: dehydratase/enolase is similar to: | PaperBLAST |
GUDD_ECOLI / P0AES2: Glucarate dehydratase; GDH; GlucD; D-glucarate dehydratase; EC 4.2.1.40 from Escherichia coli | 30% id, 70% cov |
| SM_b20510: galactonate dehydratase is similar to: | PaperBLAST |
GUDD_ECOLI / P0AES2: Glucarate dehydratase; GDH; GlucD; D-glucarate dehydratase; EC 4.2.1.40 from Escherichia coli | 26% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 28189-28611 (frame -3) on NC_003037 is similar to: | PaperBLAST |
GUDD_ACIAD / Q6FFQ2: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Acinetobacter baylyi | 32% id, 25% cov |
GUDD_PSEPU / P42206: Glucarate dehydratase; GDH; GlucD; EC 4.2.1.40 from Pseudomonas putida | 31% id, 25% cov |
Lawrence Berkeley National Laboratory