Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00077: threonine synthase
is similar to:
PaperBLAST

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

70% id,
100% cov

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

43% id,
100% cov

THRC_YEAST / P16120: Threonine synthase; TS; EC 4.2.3.1 from Saccharomyces cerevisiae
P16120: threonine synthase (EC 4.2.3.1) from Saccharomyces cerevisiae

43% id,
93% cov

More...

SMa0485: threonine synthase
is similar to:
PaperBLAST

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

40% id,
93% cov

THRC_YEAST / P16120: Threonine synthase; TS; EC 4.2.3.1 from Saccharomyces cerevisiae
P16120: threonine synthase (EC 4.2.3.1) from Saccharomyces cerevisiae

37% id,
89% cov

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

35% id,
94% cov

More...

SM_b20432: threonine dehydratase
is similar to:
PaperBLAST

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

29% id,
79% cov

THRC_MYCTU / P9WG59: Threonine synthase; TS; EC 4.2.3.1 from Mycobacterium tuberculosis
P9WG59: threonine synthase (EC 4.2.3.1) from Mycobacterium tuberculosis

27% id,
84% cov

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

26% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory