Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 35 curated entries in PaperBLAST's database that match '4.3.1.3'.

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SM_b21165: histidine ammonia-lyase
is similar to:
PaperBLAST

SM_b21165: Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti

100% id,
100% cov

PGA1_c36340: Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens

63% id,
98% cov

Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis

59% id,
100% cov

More...

SMc00669: histidine ammonia-lyase
is similar to:
PaperBLAST

AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

48% id,
97% cov

Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

48% id,
95% cov

Ga0059261_3963: Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis

40% id,
94% cov

More...

SMa0306: histidine ammonia-lyase
is similar to:
PaperBLAST

Pf1N1B4_1582: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

32% id,
97% cov

AO356_09605: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

31% id,
96% cov

Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis

29% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory