Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00290: lactoylglutathione lyase
is similar to:
PaperBLAST

Q9I5L8: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

40% id,
97% cov

Q9HY85: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

38% id,
100% cov

P0A0T3: lactoylglutathione lyase (EC 4.4.1.5) from Neisseria meningitidis

42% id,
91% cov

More...

SMc01961: hypothetical protein
is similar to:
PaperBLAST

Q9CJC0: lactoylglutathione lyase (EC 4.4.1.5) from Lactococcus lactis

38% id,
88% cov

SMa0374: dioxygenase/lyase
is similar to:
PaperBLAST

Q9CJC0: lactoylglutathione lyase (EC 4.4.1.5) from Lactococcus lactis

35% id,
72% cov

SM_b21202: hypothetical protein
is similar to:
PaperBLAST

Q9CJC0: lactoylglutathione lyase (EC 4.4.1.5) from Lactococcus lactis

33% id,
71% cov

SMa0275: hypothetical protein
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

42% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

154820-155422 (frame +2) on NC_003037
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana
Also see hits to annotated proteins above

39% id,
49% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory