Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 15 curated entries in PaperBLAST's database that match '5.3.1.14' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02321: sugar isomerase
is similar to:
PaperBLAST

SMc02321: L-rhamnose isomerase (EC 5.3.1.14) from Sinorhizobium meliloti

100% id,
100% cov

Q75WH8: L-rhamnose isomerase (EC 5.3.1.14) from Pseudomonas stutzeri

79% id,
99% cov

HSERO_RS22240: L-rhamnose isomerase (EC 5.3.1.14) from Herbaspirillum seropedicae

65% id,
100% cov

More...

SMa1495: aminotransferase
is similar to:
PaperBLAST

A4XHV7: L-rhamnose isomerase (EC 5.3.1.14) from Caldicellulosiruptor saccharolyticus

32% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory