Curated BLAST for Genomes


Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 23 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03163: xylose isomerase
is similar to:

SMc03163: Xylose isomerase (EC from Sinorhizobium meliloti

100% id,
100% cov

PGA1_c14000: Xylose isomerase (EC from Phaeobacter inhibens

71% id,
100% cov

C7G532: xylose isomerase (EC from Vibrio sp.

63% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory