Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 23 curated entries in PaperBLAST's database that match '5.3.1.5' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc03163: xylose isomerase is similar to:	PaperBLAST
SMc03163: Xylose isomerase (EC 5.3.1.5) from Sinorhizobium meliloti	100% id, 100% cov
PGA1_c14000: Xylose isomerase (EC 5.3.1.5) from Phaeobacter inhibens	71% id, 100% cov
C7G532: xylose isomerase (EC 5.3.1.5) from Vibrio sp.	63% id, 99% cov
BWI76_RS27025: Xylose isomerase (EC 5.3.1.5) from Klebsiella michiganensis	63% id, 99% cov
AO356_28500: Xylose isomerase (EC 5.3.1.5) from Pseudomonas fluorescens	62% id, 99% cov
XYLA_ECOLI / P00944: Xylose isomerase; D-xylulose keto-isomerase; EC 5.3.1.5 from Escherichia coli XylA / b3565: xylose isomerase (EC 5.3.1.5) from Escherichia coli xylA / GB\|AAC76589.1: xylose isomerase; EC 5.3.1.5 from Escherichia coli xylA / P00944: xylose isomerase (EC 5.3.1.5) from Escherichia coli	62% id, 99% cov
BPHYT_RS32825: Xylose isomerase (EC 5.3.1.5) from Burkholderia phytofirmans	61% id, 99% cov
PS417_10945: Xylose isomerase (EC 5.3.1.5) from Pseudomonas simiae	61% id, 99% cov
Q8A9M2: xylose isomerase (EC 5.3.1.5) from Bacteroides thetaiotaomicron	54% id, 99% cov
Echvi_1876: Xylose isomerase (EC 5.3.1.5) from Echinicola vietnamensis	52% id, 100% cov
D2DK62: xylose isomerase (EC 5.3.1.5) from Thermoanaerobacter ethanolicus	53% id, 99% cov
Q9P8C9: xylose isomerase (EC 5.3.1.5) from Piromyces sp.	52% id, 100% cov
D9SR73: xylose isomerase (EC 5.3.1.5) from Clostridium cellulovorans	51% id, 99% cov
XYLA_THESA / P30435: Xylose isomerase; EC 5.3.1.5 from Thermoanaerobacterium saccharolyticum	51% id, 99% cov
B7SLY1: xylose isomerase (EC 5.3.1.5) from Orpinomyces sp.	50% id, 100% cov
xylA / G2TH70: xylA (EC 5.3.1.5) from Weizmannia coagulans	48% id, 97% cov
A1A0H0: xylose isomerase (EC 5.3.1.5) from Bifidobacterium adolescentis	44% id, 98% cov
XYLA_LEVBR / P29443: Xylose isomerase; EC 5.3.1.5 from Levilactobacillus brevis	43% id, 99% cov
P26997: xylose isomerase (EC 5.3.1.5) from Thermus thermophilus	30% id, 95% cov
P24300: xylose isomerase (EC 5.3.1.5) from Streptomyces rubiginosus	32% id, 73% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory