Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMa0058: N-acylglucosamine 2-epimerase
is similar to:
PaperBLAST

MANI_MARM1 / F2JVT6: D-mannose isomerase; MI; EC 5.3.1.7 from Marinomonas mediterranea

50% id,
99% cov

BPHYT_RS02050: D-mannose isomerase (EC 5.3.1.7) from Burkholderia phytofirmans

53% id,
92% cov

Sama_0560: D-mannose isomerase (EC 5.3.1.7) from Shewanella amazonensis

47% id,
99% cov

More...

SM_b21082: mannose-6-phosphate isomerase, GDP-mannose pyrophosphorylase
is similar to:
PaperBLAST

MANI_THEFU / A0A077LPS9: D-mannose isomerase; EC 5.3.1.7 from Thermobifida fusca

30% id,
95% cov

AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

29% id,
98% cov

Pf1N1B4_597: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

30% id,
86% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory